Data: SearchMouse (Mus musculus)

Found Studies

	Mdb ID	Title	Host Species	Parasite Species
2019
1	2019_6 Details DOI -	Schistosoma mansoni worm infection regulates the intestinal microbiota and susceptibility to colitis	None	None
	Authors Achilleas Floudasa, Gabriella Avielloa, Christian Schwartza, Ian B. Jefferyb, Paul W. O'Tooleb and Padraic G. Fallon Host Species None Control Species Mouse (Mus musculus) Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Roche 454) Alpha diversity Evenness Not assessed Richness Not assessed Beta diversity Evenness Not assessed Sample Site None Sample Type None Sequence Data Repository Missing Journal TODO Project Number New project number DOI https://doi.org/10.1128/IAI.00275-19
2	2019_5 Details DOI -	Contribution of the gut microbiota in P28GST-mediated anti-inflammatory effects: experimental and clinical insights	None	None
	Authors Benoît Foligné , Coline Plé, Marie Titécat, Arnaud Dendooven, Aurélien Pagny, Catherine Daniel, Elisabeth Singer, Muriel Pottier, Benjamin Bertin, Christel Neut, Dominique Deplanque, Laurent Dubuquoy, Pierre Desreumaux, Monique Capron, Annie Standaert Host Species None Control Species Mouse (Mus musculus) Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness Increase Richness None - no change Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository TODO Journal TODO Project Number New project number DOI https://doi.org/10.3390/cells8060577
3	2019_3 Details DOI -	Chinese liver fluke Clonorchis sinensis infection changes the gut microbiome and increases probiotic Lactobacillus in mice	None	None
	Authors Kim JY, Kim EM, Yi M, Lee J, Lee S, Hwang Y, Yong D, Sohn WM, Yong TS Host Species None Control Species Mouse (Mus musculus) Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository Missing Journal Parasitology Research Project Number Unavailable DOI https://doi.org/10.1007/s00436-018-6179-x
4	2019_12 Details DOI -	Exclusive dependence of IL-10Rα signalling on intestinal microbiota homeostasis and control of whipworm infection	None	None
	Authors María A. Duque-Correa , Natasha A. Karp, Catherine McCarthy, Simon Forman, David Goulding, Geetha Sankaranarayanan, Timothy P. Jenkins, Adam J. Reid, Emma L. Cambridge, Carmen Ballesteros Reviriego, The Sanger Mouse Genetics Project, The 3i consortium , Werner Müller, Cinzia Cantacessi, Gordon Dougan, Richard K. Grencis, Matthew Berriman Host Species None Control Species Mouse (Mus musculus) Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness Decrease Richness Decrease Beta diversity Evenness Increase Sample Site None Sample Type None Sequence Data Repository European Nucleotide Archive (ENA) Journal PLoS Pathogens Project Number ERP016361 DOI https://doi.org/10.1371/journal.ppat.1007265
5	2019_11 Details DOI -	The parasitic worm product ES-62 normalises the gut microbiota bone marrow axis in inflammatory arthritis	None	None
	Authors James Doonan, Anuradha Tarafdar, Miguel A. Pineda, Felicity E. Lumb, Jenny Crowe, Aneesah M. Khan, Paul A. Hoskisson, Margaret M. Harnett, William Harnett Host Species None Control Species Mouse (Mus musculus) Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of 16S rRNA amplicons (Ion Torrent) Alpha diversity Evenness Increase Richness Increase Beta diversity Evenness Not assessed Sample Site None Sample Type None Sequence Data Repository TODO Journal TODO Project Number mgm4777616.3, 4777615.3, 4777614.3, 4777613.3, 4777481.3, 4777480.3, 4777479.3, 4777478.3, 4767994.3, 4767993.3, 4767992.3, 4767991.3, 4767990.3, 4767989.3, 4767988.3, 4767987.3, 4767986.3, 4738191.3, 4738190.3, 4738025.3, 4737887.3, 4737053.3 and 4737052.3 DOI https://doi.org/10.1038/s41467-019-09361-0
6	2019_10 Details DOI - Open Access	Suppression of obesity by an intestinal helminth through interactions with intestinal microbiota	None	None
	Authors Chikako Shimokawa, Seiji Obi, Mioko Shibata, Alex Olia, Takashi Imai, Kazutomo Suzue, Hajime Hisaeda Host Species None Control Species Mouse (Mus musculus) Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness Not assessed Richness Not assessed Beta diversity Evenness Not assessed Sample Site None Sample Type None Sequence Data Repository TODO Journal Infection and Immunity (WAS: American Society for Microbiology Journals) Project Number New project number DOI https://doi.org/10.1128/IAI.00042-19
2018
7	2018_9 Details DOI -	Intestinal fluke Metagonimus yokogawai infection increases probiotic Lactobacillus in mouse cecum	None	None
	Authors Kim JY, Kim EM, Yi M, Lee J, Lee S, Hwang Y, Yong D, Sohn WM, Yong TS Host Species None Control Species Mouse (Mus musculus) Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository National Center for Biotechnology Information (NCBI) Journal Experimental Parasitology Project Number SRP154312 DOI https://doi.org/10.1016/j.exppara.2018.08.002
8	2018_4 Details DOI - Open Access	Helminth-induced alterations of the gut microbiota exacerbate bacterial colitis	None	None
	Authors Su C, Su L, Li Y, Long SR, Chang J, Zhang W, Walker WA, Xavier RX, Cherayil BJ, Shi HN Host Species None Control Species Mouse (Mus musculus) Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Roche 454) Alpha diversity Evenness None - no change Richness Increase Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository Missing Journal Mucosal Immunology Project Number Unavailable DOI https://doi.org/10.1038/mi.2017.20
9	2018_2 Details DOI - Open Access	Schistosoma mansoni infection is associated with quantitative and qualitative modifcations of the mammalian intestinal microbiota	None	None
	Authors Jenkins TP, Peachey LE, Ajami NJ, MacDonald AS, Hsieh MH, Brindley PJ, Cantacessi C, Rinaldi G Host Species None Control Species Mouse (Mus musculus) Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness Decrease Richness Decrease Beta diversity Evenness Increase Sample Site None Sample Type None Sequence Data Repository Mendeley Journal Scientific Reports Project Number 10.17632/y8c7vpc8zp.1 DOI https://doi.org/10.1038/s41598-018-30412-x
10	2018_13 Details DOI - Open Access	Manipulation of host and parasite microbiotas: survival strategies during chronic nematode infection	None	None
	Authors White EC, Houlden A, Bancroft AJ, Hayes KS, Goldrick M, Grencis RK, Roberts IS Host Species None Control Species Mouse (Mus musculus) Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Roche 454) Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness Increase Sample Site None Sample Type None Sequence Data Repository European Nucleotide Archive (ENA) Journal Science Advances Project Number PRJEB12611 DOI DOI: 10.1126/sciadv.aap7399
2015
11	2015_4 Details DOI - Open Access	Type 2 immunity-dependent reduction of segmented filamentous bacteria in mice infected with the helminthic parasite Nippostrongylus brasiliensis	None	None
	Authors Fricke WF, Song Y, Wang AJ, Smith A, Grinchuk V, Pei C, Ma B, Lu N, Urban JF Jr, Shea-Donohue T, Zhao A Host Species None Control Species Mouse (Mus musculus) Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository National Center for Biotechnology Information (NCBI) Journal Microbiome Project Number PRJNA255974 DOI https://doi.org/10.1186/s40168-015-0103-8
12	2015_3 Details DOI - Open Access	Chronic Trichuris muris infection in C57BL/6 mice causes significant changes in host microbiota and metabolome: effects reversed by pathogen clearance	None	None
	Authors Houlden A, Hayes KS, Bancroft AJ, Worthington JJ, Wang P, Grencis RK, Roberts IS Host Species None Control Species Mouse (Mus musculus) Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Roche 454) Alpha diversity Evenness Decrease Richness Decrease Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository European Nucleotide Archive (ENA) Journal PLoS One Project Number ERP008663 DOI https://doi.org/10.1371/journal.pone.0125945
13	2015_2 Details DOI - Open Access	Chronic Trichuris muris infection decreases diversity of the intestinal microbiota and concomitantly increases the abundance of Lactobacilli	None	None
	Authors Holm JB, Sorobetea D, Kiilerich P, Ramayo-Caldas Y, Estellé J, Ma T, Madsen L, Kristiansen K, Svensson-Frej M Host Species None Control Species Mouse (Mus musculus) Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness Increase Richness Increase Beta diversity Evenness Increase Sample Site None Sample Type None Sequence Data Repository European Nucleotide Archive (ENA) Journal PLoS One Project Number ERP006108 DOI https://doi.org/10.1371/journal.pone.0125495
2014
14	2014_3 Details DOI - Open Access	Commensal–pathogen interactions in the intestinal tract: Lactobacilli promote infection with, and are promoted by, helminth parasites	None	None
	Authors Reynolds LA, Smith KA, Filbey KJ, Harcus Y, Hewitson JP, Redpath SA, Valdez Y, Yebra MJ, Finlay BB, Maizels RM Host Species None Control Species Mouse (Mus musculus) Infection Type Experimental Parasite Species None Profiling Method Cloning and bacterial 16S rRNA amplicon qPCR Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository Missing Journal Gut Microbes Project Number N/A (clone library) DOI https://doi.org/10.4161/gmic.32155
2013
15	2013_2 Details DOI - Open Access	Small intestinal nematode infection of mice is associated with increased enterobacterial loads alongside the intestinal tract	None	None
	Authors Rausch S, Held J, Fischer A, Heimesaat MM, Kühl AA, Bereswill S, Hartmann S Host Species None Control Species Mouse (Mus musculus) Infection Type Experimental Parasite Species None Profiling Method Bacterial 16S rRNA qPCR Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository Missing Journal PLoS One Project Number N/A DOI https://doi.org/10.1371/journal.pone.0074026
2010
16	2010_1 Details DOI -	Alteration of the murine gut microbiota during infection with the parasitic helminth Heligmosomoides polygyrus	None	None
	Authors Walk ST, Blum AM, Ang-Sheng S, Weinstock JV, Young VB Host Species None Control Species Mouse (Mus musculus) Infection Type Experimental Parasite Species None Profiling Method Cloning and bacterial 16S rRNA amplicon qPCR Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository Missing Journal Inflammatory Bowel Diseases Project Number N/A (qPCR) DOI https://doi.org/10.1002/ibd.21299

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