| Brown Digital Repository | 0 | |
| DDBJ | 0 | |
| European Nucleotide Archive (ENA) | 0 | |
| Mendeley | 0 | |
| MG-RAST | 0 | |
| Missing | 0 | |
| National Center for Biotechnology Information (NCBI) | 0 | |
| Nematode.net | 0 | |
| Not applicable (qPCR) | 0 | |
| SRA | 0 | |
| TODO | 0 | |
| Total Studies: 0 | ||
| Decrease | 0 | |
| Increase | 0 | |
| None - no change | 0 | |
| Not assessed | 0 | |
| Total Studies: 0 | ||
| Experimental | 44 | |
| Natural | 24 | |
| Total Studies: 68 | ||
| Abomasum | 3 | |
| Bile ducts | 1 | |
| Caecum | 8 | |
| Colon | 6 | |
| Colorectum | 1 | |
| COMPOUND: ileum, caecum | 0 | |
| COMPOUND: ileum, caecum, colon | 0 | |
| Duodenum | 3 | |
| Ileum | 3 | |
| Large intestine | 1 | |
| Liver | 0 | |
| None | 3 | |
| Rumen | 1 | |
| Small intestine | 2 | |
| Stomach | 1 | |
| Total Studies: 33 | ||
| -- N/A -- | 1 | |
| Actinobacteria | 3 | |
| Bacteroides | 7 | |
| Bacteroidetes | 8 | |
| Candidatus Saccharibacteria | 1 | |
| Cyanobacteria | 2 | |
| Deferribacteres | 2 | |
| Elusimicrobia | 1 | |
| Euryarchaeota | 2 | |
| Fibrobacteres | 1 | |
| Firmicutes | 13 | |
| Fusobacteria | 1 | |
| Gammatimonadetes | 1 | |
| Lachnospiraceae | 0 | |
| Proteobacteria | 6 | |
| Spirochaetes | 3 | |
| Tenericutes | 4 | |
| Verrucomicrobia | 2 | |
| Total Studies: 58 | ||
| -- N/A -- | 1 | |
| Actinobacteria | 1 | |
| Alphaproteobacteria | 1 | |
| Bacilli | 3 | |
| Bacteroidia | 1 | |
| Betaproteobacteria | 1 | |
| Clostridia | 4 | |
| Coreobacteriia | 1 | |
| Deltaproteobacteria | 1 | |
| Endomicrobia | 1 | |
| Erysipelotrichi | 1 | |
| Erysipelotrichia | 1 | |
| Flavobacteria | 1 | |
| Fusobacteriia | 2 | |
| Gammaproteobacteria | 2 | |
| Melainabacteria | 1 | |
| Methanomicrobia | 1 | |
| Mollicutes | 3 | |
| Negativicutes | 1 | |
| Opitutae | 1 | |
| Tenericutes | 1 | |
| Verrucomicrobiae | 2 | |
| Total Studies: 32 | ||
| -- N/A -- | 1 | |
| Anaeroplasmatales | 1 | |
| Bacteroidales | 4 | |
| Bifidobacteriales | 1 | |
| Cerasiococcales | 1 | |
| Clostridiales | 4 | |
| Coriobacteriales | 2 | |
| Desulfovibrionales | 1 | |
| Elusimicrobiales | 1 | |
| Enterobacterales | 1 | |
| Erysipelotrichales | 1 | |
| Flavobacteriales | 1 | |
| Fusobacteriales | 2 | |
| Gastranaerophilales | 1 | |
| GMD14H09 | 1 | |
| Lactobacillales | 3 | |
| Methanomicrobiales | 1 | |
| Pasteurellales | 2 | |
| Pseudomonadales | 2 | |
| RF32 | 1 | |
| RF9 | 1 | |
| Rickettsiales | 1 | |
| Selenomonadales | 1 | |
| Turicibacterales | 2 | |
| Verrucomicrobiales | 2 | |
| Total Studies: 39 | ||