Data: SearchUNKNOWN

Found Studies

	Mdb ID	Title	Host Species	Parasite Species
2020
1	2020_6 Details DOI - Open Access	Experimental infection with the hookworm, Necator americanus, promotes gut microbial diversity in human volunteers with relapsing multiple sclerosis	None	None
	Authors Timothy Jenkins, David Pritchard, Radu Tanasescu, Gary Telford, Marina Paraiakovou, Cris Constantinescu, Cinzia Cantacessi Host Species None Control Species UNKNOWN Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository Mendeley Journal TODO Project Number 10.17632/pkk4vtc57r.1 DOI 10.21203/rs.2.24428/v1
2	2020_5 Details DOI - Open Access	Infection with the sheep gastrointestinal nematode Teladorsagia circumcincta increases luminal pathobionts	None	None
	Authors Alba Cortés, John Wills, Xiaopei Su, Rachel E. Hewitt, Jack Robertson, Riccardo Scotti, Daniel R. G. Price, Yvonne Bartley, Tom N. McNeilly, Lutz Krause, Jonathan J. Powell, Alasdair J. Nisbet, Cinzia Cantacessi Host Species None Control Species UNKNOWN Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository European Nucleotide Archive (ENA) Journal TODO Project Number PRJEB33114 DOI 10.1186/s40168-020-00818-9
3	2020_4 Details DOI -	Worm expulsion is independent of alterations in composition of the colonic bacteria that occur during experimental Hymenolepis diminuta-infection in mice.	None	None
	Authors Adam Shute, Arthur Wang, Timothy S. Jayme, Marc Strous, Kathy D. McCoy, Andre G. Buret, Derek M. McKay Host Species None Control Species UNKNOWN Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository TODO Journal Gut Microbes Project Number missing DOI 10.1080/19490976.2019.1688065
4	2020_3 Details DOI -	The gut microbiota response to helminth infection depends on host sex and genotype.	None	None
	Authors Fei Ling, Natalie Steinel, Jesse Weber, Lei Ma, Chris Smith, Decio Correa, Bin Zhu, Daniel Bolnick & Gaoxue Wang Host Species None Control Species UNKNOWN Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository SRA Journal The ISME Journal Project Number PRJNA398629 and PRJNA398630 DOI 10.1038/s41396-020-0589-3
5	2020_2 Details DOI - Open Access	Infection with a small intestinal helminth, Heligmosomoides polygyrus bakeri, consistently alters microbial communities throughout the murine small and large intestine.	None	None
	Authors Alexis Rapin, Audrey Chuat, Luc Lebon, Mario M. Zaiss, Benjamin J. Marsland, Nicola L. Harris Host Species None Control Species UNKNOWN Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository TODO Journal International Journal for Parasitology Project Number PRJEB32288 DOI 10.1016/j.ijpara.2019.09.005
6	2020_1 Details DOI -	Gut microbial signatures associated with moxidectin treatment efficacy of Haemonchus contortus in infected goats.	None	None
	Authors Fang Liu, Yue Xie, Anne M.Zajac, Yan Hu, Raffi V.Aroian, Joseph F.Urban Jr., Robert W.Li Host Species None Control Species UNKNOWN Infection Type Experimental Parasite Species None Profiling Method Whole metagenome shotgun sequencing (Illumina) Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository National Center for Biotechnology Information (NCBI) Journal TODO Project Number PRJNA564780 DOI 10.1016/j.vetmic.2020.108607
2019
7	2019_9 Details DOI - Open Access	Interactions between parasitic infections and the human gut microbiome in Odisha, India	None	None
	Authors Tiffany Huwe, Birendra Kumar Prusty, Aisurya Ray, Shaun Lee, Balachandran Ravindran, Edwin Michael Host Species None Control Species Human (Homo Sapiens) Infection Type Natural Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness Increase Sample Site None Sample Type None Sequence Data Repository TODO Journal The American Journal of Tropical Medicine and Hygiene Project Number 0 DOI https://doi.org/10.4269/ajtmh.18-0968
8	2019_8 Details DOI -	Removal of adult cyathostomins alters faecal microbiota and promotes an inflammatory phenotype in horses	None	None
	Authors Nicola Walshe, Vivienne Duggan, Raul Cabrera-Rubio, Fiona Crispie, Paul Cotter, Orna Feehan, Grace Mulcahy Host Species None Control Species Horse (Equus ferus caballus) Infection Type Natural Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness Increase Richness Increase Beta diversity Evenness Not assessed Sample Site None Sample Type None Sequence Data Repository TODO Journal TODO Project Number New project number DOI https://doi.org/10.1016/j.ijpara.2019.02.003
9	2019_7 Details DOI -	The impact of anthelmintic treatment on human gut microbiota based on cross-sectional and pre- and postdeworming comparisons in Western Kenya	None	None
	Authors Alice V. Easton, Mariam Quiñones, Ivan Vujkovic-Cvijin, Rita G. Oliveira, Stella Kepha, Maurice R. Odiere, Roy M. Anderson, Yasmine Belkaid, Thomas B. Nutman Host Species None Control Species Human (Homo Sapiens) Infection Type Natural Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository TODO Journal TODO Project Number New project number DOI https://doi.org/10.1128/mBio.00519-19
10	2019_6 Details DOI -	Schistosoma mansoni worm infection regulates the intestinal microbiota and susceptibility to colitis	None	None
	Authors Achilleas Floudasa, Gabriella Avielloa, Christian Schwartza, Ian B. Jefferyb, Paul W. O'Tooleb and Padraic G. Fallon Host Species None Control Species Mouse (Mus musculus) Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Roche 454) Alpha diversity Evenness Not assessed Richness Not assessed Beta diversity Evenness Not assessed Sample Site None Sample Type None Sequence Data Repository Missing Journal TODO Project Number New project number DOI https://doi.org/10.1128/IAI.00275-19
11	2019_5 Details DOI -	Contribution of the gut microbiota in P28GST-mediated anti-inflammatory effects: experimental and clinical insights	None	None
	Authors Benoît Foligné , Coline Plé, Marie Titécat, Arnaud Dendooven, Aurélien Pagny, Catherine Daniel, Elisabeth Singer, Muriel Pottier, Benjamin Bertin, Christel Neut, Dominique Deplanque, Laurent Dubuquoy, Pierre Desreumaux, Monique Capron, Annie Standaert Host Species None Control Species Mouse (Mus musculus) Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness Increase Richness None - no change Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository TODO Journal TODO Project Number New project number DOI https://doi.org/10.3390/cells8060577
12	2019_4 Details DOI -	Microbiome analysis as a platform R&D tool for parasitic nematode disease management	None	None
	Authors Glenn Hogan, Sidney Walker, Frank Turnbull, Tania Curiao, Alison A. Morrison, Yensi Flores, Leigh Andrews, Marcus J. Claesson, Mark Tangney, Dave J. Bartley Host Species None Control Species Sheep (Ovis aries) Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness Decrease Richness Decrease Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository Missing Journal TODO Project Number New project number DOI https://doi.org/10.1038/s41396-019-0462-4
13	2019_21 Details DOI -	Exploring interactions between Blastocystis sp., Strongyloides spp. and the gut microbiomes of wild chimpanzees in Senegal	None	None
	Authors Justinn Renelies-Hamilton, Marc Noguera-Julian, Mariona Parera, Roger Paredes, Liliana Pacheco, Elena Dacal, José M.Saugar, José M.Rubio, Michael Poulsen, Pamela C.Köster, David Carmena Host Species None Control Species UNKNOWN Infection Type Natural Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository National Center for Biotechnology Information (NCBI) Journal TODO Project Number PRJNA523828 DOI 10.1016/j.meegid.2019.104010.
14	2019_20 Details DOI - Open Access	Trichinella spiralis infection decreases the diversity of the intestinal flora in the infected mouse.	None	None
	Authors Sha Liu, Jin Pan, Xiangli Meng, Junping Zhu, Jie Zhou, Xinping Zhu Host Species None Control Species UNKNOWN Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository TODO Journal TODO Project Number PRJNA479716 and PRJNA553325 DOI 10.1016/j.jmii.2019.09.009
15	2019_19 Details DOI - Open Access	Linking the effects of helminth infection, diet and the gut microbiota with human whole-blood signatures	None	None
	Authors Soo Ching Lee, Mei San Tang, Alice V. Easton, Joseph Cooper Devlin, Ling Ling Chua, Ilseung Cho, Foong Ming Moy, Tsung Fei Khang, Yvonne A. L. Lim , P’ng Loke Host Species None Control Species UNKNOWN Infection Type Natural Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository European Nucleotide Archive (ENA) Journal PLoS Pathogens Project Number PRJEB34956 and PRJEB34957 DOI 10.1371/journal.ppat.1008066
16	2019_18 Details DOI - Open Access	The Effect of Gut Microbiome Composition on Human Immune Responses: An Exploration of Interference by Helminth Infections	None	None
	Authors Ivonne Martin, Maria M. M. Kaisar, Aprilianto E. Wiria,Firdaus Hamid, Yenny Djuardi, Erliyani Sartono, Bruce A. Rosa, Makedonka Mitreva, Taniawati Supali, Jeanine J. Houwing-Duistermaat, Maria Yazdanbakhsh, and Linda J. Wammes Host Species None Control Species UNKNOWN Infection Type Natural Parasite Species None Profiling Method Cloning and bacterial 16S rRNA amplicon qPCR Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository TODO Journal TODO Project Number SAMN07688522 to SAMN07688545 DOI 10.3389/fgene.2019.01028
17	2019_17 Details DOI -	Ascaris suum infection was associated with a worm-independent reduction in microbial diversity and altered metabolic potential in the porcine gut microbiome.	None	None
	Authors Yueying Wang, Fang Liu, Joseph F. UrbanJr., Oonagh Paerewijck, Peter Geldhof, Robert W.Li Host Species None Control Species UNKNOWN Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository TODO Journal International Journal for Parasitology Project Number SRP127199 DOI 10.1016/j.ijpara.2018.10.007
18	2019_16 Details DOI - Open Access	Cognitive and Microbiome Impacts of Experimental Ancylostoma ceylanicum Hookworm Infections in Hamsters	None	None
	Authors Samuel C. Pan, Doyle V. Ward, Yunqiang Yin, Yan Hu, Mostafa A. Elfawal, Robert E. Clark, and Raffi V. Aroian Host Species None Control Species UNKNOWN Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository TODO Journal Scientific Reports Project Number PRJNA535443 DOI 10.1038/s41598-019-44301-4
19	2019_15 Details DOI - Open Access	Sequential Changes in the Host Gut Microbiota During Infection With the Intestinal Parasitic Nematode Strongyloides venezuelensis	None	None
	Authors Tanzila Afrin, Kazunori Murase, Asuka Kounosu, Vicky L. Hunt, Mark Bligh, Yasunobu Maeda, Akina Hino, Haruhiko Maruyama, Isheng J. Tsai, and Taisei Kikuchi Host Species None Control Species UNKNOWN Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository TODO Journal TODO Project Number SAMD00148911 DOI 10.3389/fcimb.2019.00217
20	2019_14 Details DOI -	Mucosal barrier and Th2 immune responses are enhanced by dietary inulin in pigs infected with Trichuris suis	None	None
	Authors Laura J. Myhill, Sophie Stolzenbach, Tina V. A. Hansen, Kerstin Skovgaard, C. Rune Stensvold, Lee O'Brien Andersen, Peter Nejsum, Helena Mejer, Stig M. Thamsborg, Andrew R. Williams Host Species None Control Species Pig (Sus scrofa domestica) Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository European Nucleotide Archive (ENA) Journal Frontiers in Immunology Project Number PRJEB29079 DOI https://doi.org/10.3389/fimmu.2018.02557
21	2019_13 Details DOI -	Dysbiosis associated with acute helminth infections in herbivorous youngstock – observations and implications	None	None
	Authors Laura E. Peachey, Cecilia Castro, Rebecca A. Molena, Timothy P. Jenkins, Julian L. Griffin, Cinzia Cantacessi Host Species None Control Species Horse (Equus ferus caballus) Infection Type Natural Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository Mendeley Journal Scientific Reports Project Number DOI: 10.17632/95m8sfd3kt.1 DOI In press
22	2019_12 Details DOI -	Exclusive dependence of IL-10Rα signalling on intestinal microbiota homeostasis and control of whipworm infection	None	None
	Authors María A. Duque-Correa , Natasha A. Karp, Catherine McCarthy, Simon Forman, David Goulding, Geetha Sankaranarayanan, Timothy P. Jenkins, Adam J. Reid, Emma L. Cambridge, Carmen Ballesteros Reviriego, The Sanger Mouse Genetics Project, The 3i consortium , Werner Müller, Cinzia Cantacessi, Gordon Dougan, Richard K. Grencis, Matthew Berriman Host Species None Control Species Mouse (Mus musculus) Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness Decrease Richness Decrease Beta diversity Evenness Increase Sample Site None Sample Type None Sequence Data Repository European Nucleotide Archive (ENA) Journal PLoS Pathogens Project Number ERP016361 DOI https://doi.org/10.1371/journal.ppat.1007265
23	2019_11 Details DOI -	The parasitic worm product ES-62 normalises the gut microbiota bone marrow axis in inflammatory arthritis	None	None
	Authors James Doonan, Anuradha Tarafdar, Miguel A. Pineda, Felicity E. Lumb, Jenny Crowe, Aneesah M. Khan, Paul A. Hoskisson, Margaret M. Harnett, William Harnett Host Species None Control Species Mouse (Mus musculus) Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of 16S rRNA amplicons (Ion Torrent) Alpha diversity Evenness Increase Richness Increase Beta diversity Evenness Not assessed Sample Site None Sample Type None Sequence Data Repository TODO Journal TODO Project Number mgm4777616.3, 4777615.3, 4777614.3, 4777613.3, 4777481.3, 4777480.3, 4777479.3, 4777478.3, 4767994.3, 4767993.3, 4767992.3, 4767991.3, 4767990.3, 4767989.3, 4767988.3, 4767987.3, 4767986.3, 4738191.3, 4738190.3, 4738025.3, 4737887.3, 4737053.3 and 4737052.3 DOI https://doi.org/10.1038/s41467-019-09361-0
24	2019_10 Details DOI - Open Access	Suppression of obesity by an intestinal helminth through interactions with intestinal microbiota	None	None
	Authors Chikako Shimokawa, Seiji Obi, Mioko Shibata, Alex Olia, Takashi Imai, Kazutomo Suzue, Hajime Hisaeda Host Species None Control Species Mouse (Mus musculus) Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness Not assessed Richness Not assessed Beta diversity Evenness Not assessed Sample Site None Sample Type None Sequence Data Repository TODO Journal Infection and Immunity (WAS: American Society for Microbiology Journals) Project Number New project number DOI https://doi.org/10.1128/IAI.00042-19
2015
25	2015_8 Details DOI -	(CAT) Differences in the faecal microbiome of non-diarrhoeic clinically healthy dogs and cats associated with Giardia duodenalis infection: impact of hookworms and coccidia	None	None
	Authors Šlapeta J, Dowd SE, Alanazi AD, Westman ME, Brown GK Host Species None Control Species UNKNOWN Infection Type Natural Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Roche 454) Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository National Center for Biotechnology Information (NCBI) Journal International Journal for Parasitology Project Number PRJNA276586 DOI https://doi.org/10.1016/j.ijpara.2015.04.001
26	2015_7 Details DOI -	(DOG) - Differences in the faecal microbiome of non-diarrhoeic clinically healthy dogs and cats associated with Giardia duodenalis infection: impact of hookworms and coccidia	None	None
	Authors Šlapeta J, Dowd SE, Alanazi AD, Westman ME, Brown GK Host Species None Control Species UNKNOWN Infection Type Natural Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Roche 454) Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository National Center for Biotechnology Information (NCBI) Journal International Journal for Parasitology Project Number PRJNA276586 DOI https://doi.org/10.1016/j.ijpara.2015.04.001
27	2015_5 Details DOI -	Interactions between multiple helminths and the gut microbiota in wild rodents	None	None
	Authors Kreisinger J, Bastien G, Hauffe HC, Marchesi J, Perkins SE Host Species None Control Species UNKNOWN Infection Type Natural Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Roche 454) Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness Increase Sample Site None Sample Type None Sequence Data Repository European Nucleotide Archive (ENA) Journal Philosophical Transactions of the Royal Society London B: Biolological Sciences Project Number ERP009377 DOI https://10.1098/rstb.2014.0295

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2020

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2015