Data: SearchFirmicutes

Found Studies

	Mdb ID	Title	Host Species	Parasite Species
2019
1	2019_5 Details DOI -	Contribution of the gut microbiota in P28GST-mediated anti-inflammatory effects: experimental and clinical insights	None	None
	Authors Benoît Foligné , Coline Plé, Marie Titécat, Arnaud Dendooven, Aurélien Pagny, Catherine Daniel, Elisabeth Singer, Muriel Pottier, Benjamin Bertin, Christel Neut, Dominique Deplanque, Laurent Dubuquoy, Pierre Desreumaux, Monique Capron, Annie Standaert Host Species None Control Species Mouse (Mus musculus) Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness Increase Richness None - no change Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository TODO Journal TODO Project Number New project number DOI https://doi.org/10.3390/cells8060577
2	2019_4 Details DOI -	Microbiome analysis as a platform R&D tool for parasitic nematode disease management	None	None
	Authors Glenn Hogan, Sidney Walker, Frank Turnbull, Tania Curiao, Alison A. Morrison, Yensi Flores, Leigh Andrews, Marcus J. Claesson, Mark Tangney, Dave J. Bartley Host Species None Control Species Sheep (Ovis aries) Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness Decrease Richness Decrease Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository Missing Journal TODO Project Number New project number DOI https://doi.org/10.1038/s41396-019-0462-4
3	2019_2 Details DOI - Open Access	Urogenital schistosomiasis is associated with signatures of microbiome dysbiosis in Nigerian adolescents	None	None
	Authors Ajibola O, Rowan AD, Ogedengbe CO, Mshelia MB, Cabral DJ, Eze AA, Obaro S, Belenky P Host Species None Control Species Human (Homo Sapiens) Infection Type Natural Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness Increase Sample Site None Sample Type None Sequence Data Repository Brown Digital Repository Journal Scientific Reports Project Number https://repository.library.brown.edu/studio/item/bdr:698310/ DOI https://doi.org/10.1038/s41598-018-36709-1
4	2019_11 Details DOI -	The parasitic worm product ES-62 normalises the gut microbiota bone marrow axis in inflammatory arthritis	None	None
	Authors James Doonan, Anuradha Tarafdar, Miguel A. Pineda, Felicity E. Lumb, Jenny Crowe, Aneesah M. Khan, Paul A. Hoskisson, Margaret M. Harnett, William Harnett Host Species None Control Species Mouse (Mus musculus) Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of 16S rRNA amplicons (Ion Torrent) Alpha diversity Evenness Increase Richness Increase Beta diversity Evenness Not assessed Sample Site None Sample Type None Sequence Data Repository TODO Journal TODO Project Number mgm4777616.3, 4777615.3, 4777614.3, 4777613.3, 4777481.3, 4777480.3, 4777479.3, 4777478.3, 4767994.3, 4767993.3, 4767992.3, 4767991.3, 4767990.3, 4767989.3, 4767988.3, 4767987.3, 4767986.3, 4738191.3, 4738190.3, 4738025.3, 4737887.3, 4737053.3 and 4737052.3 DOI https://doi.org/10.1038/s41467-019-09361-0
5	2019_10 Details DOI - Open Access	Suppression of obesity by an intestinal helminth through interactions with intestinal microbiota	None	None
	Authors Chikako Shimokawa, Seiji Obi, Mioko Shibata, Alex Olia, Takashi Imai, Kazutomo Suzue, Hajime Hisaeda Host Species None Control Species Mouse (Mus musculus) Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness Not assessed Richness Not assessed Beta diversity Evenness Not assessed Sample Site None Sample Type None Sequence Data Repository TODO Journal Infection and Immunity (WAS: American Society for Microbiology Journals) Project Number New project number DOI https://doi.org/10.1128/IAI.00042-19
2018
6	2018_9 Details DOI -	Intestinal fluke Metagonimus yokogawai infection increases probiotic Lactobacillus in mouse cecum	None	None
	Authors Kim JY, Kim EM, Yi M, Lee J, Lee S, Hwang Y, Yong D, Sohn WM, Yong TS Host Species None Control Species Mouse (Mus musculus) Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository National Center for Biotechnology Information (NCBI) Journal Experimental Parasitology Project Number SRP154312 DOI https://doi.org/10.1016/j.exppara.2018.08.002
7	2018_4 Details DOI - Open Access	Helminth-induced alterations of the gut microbiota exacerbate bacterial colitis	None	None
	Authors Su C, Su L, Li Y, Long SR, Chang J, Zhang W, Walker WA, Xavier RX, Cherayil BJ, Shi HN Host Species None Control Species Mouse (Mus musculus) Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Roche 454) Alpha diversity Evenness None - no change Richness Increase Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository Missing Journal Mucosal Immunology Project Number Unavailable DOI https://doi.org/10.1038/mi.2017.20
8	2018_13 Details DOI - Open Access	Manipulation of host and parasite microbiotas: survival strategies during chronic nematode infection	None	None
	Authors White EC, Houlden A, Bancroft AJ, Hayes KS, Goldrick M, Grencis RK, Roberts IS Host Species None Control Species Mouse (Mus musculus) Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Roche 454) Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness Increase Sample Site None Sample Type None Sequence Data Repository European Nucleotide Archive (ENA) Journal Science Advances Project Number PRJEB12611 DOI DOI: 10.1126/sciadv.aap7399
9	2018_10 Details DOI - Open Access	Mucosal barrier and Th2 immune responses are enhanced by dietary inulin in pigs infected with Trichuris suis	None	None
	Authors Myhill LJ, Stolzenbach S, Hansen TVA, Skovgaard K, Stensvold CR, O'Brien Andersen L, Nejsum P, Mejer H, Thamsborg SM, Williams AR Host Species None Control Species Pig (Sus scrofa domestica) Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository European Nucleotide Archive (ENA) Journal Frontiers in Immunology Project Number PRJEB29079 DOI https://doi.org/10.3389/fimmu.2018.02557
10	2018_1 Details DOI - Open Access	Differential human gut microbiome assemblages during soil-transmitted helminth infections in Indonesia and Liberia	None	None
	Authors Rosa MA, Supali T, Gankpala L, Djuardi Y, Sartono E, Zhou Y, Fischer K, Martin J, Tyagi R, Bolay FK, Fischer PU, Yazdanbakhsh M, Mitreva M Host Species None Control Species Human (Homo Sapiens) Infection Type Natural Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness Increase Richness Increase Beta diversity Evenness Increase Sample Site None Sample Type None Sequence Data Repository National Center for Biotechnology Information (NCBI) Journal Microbiome Project Number PRJNA407815 DOI https://doi.org/10.1186/s40168-018-0416-5
2016
11	2016_2 Details DOI - Open Access	Impact of helminth infections and nutritional constraints on the small intestine microbiota	None	None
	Authors Cattadori IM, Sebastian A, Hao H, Katani R, Albert I, Eilertson KE, Kapur V, Pathak A, Mitchell S Host Species None Control Species Rabbits (Oryctolagus cuniculus) Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Roche 454) Alpha diversity Evenness Decrease Richness Decrease Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository Missing Journal PLoS One Project Number Unavailable DOI https://doi.org/10.1371/journal.pone.0159770
2015
12	2015_5 Details DOI -	Interactions between multiple helminths and the gut microbiota in wild rodents	None	None
	Authors Kreisinger J, Bastien G, Hauffe HC, Marchesi J, Perkins SE Host Species None Control Species UNKNOWN Infection Type Natural Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Roche 454) Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness Increase Sample Site None Sample Type None Sequence Data Repository European Nucleotide Archive (ENA) Journal Philosophical Transactions of the Royal Society London B: Biolological Sciences Project Number ERP009377 DOI https://10.1098/rstb.2014.0295
13	2015_4 Details DOI - Open Access	Type 2 immunity-dependent reduction of segmented filamentous bacteria in mice infected with the helminthic parasite Nippostrongylus brasiliensis	None	None
	Authors Fricke WF, Song Y, Wang AJ, Smith A, Grinchuk V, Pei C, Ma B, Lu N, Urban JF Jr, Shea-Donohue T, Zhao A Host Species None Control Species Mouse (Mus musculus) Infection Type Experimental Parasite Species None Profiling Method High throughput sequencing of bacterial 16S rRNA amplicons (Illumina) Alpha diversity Evenness None - no change Richness None - no change Beta diversity Evenness None - no change Sample Site None Sample Type None Sequence Data Repository National Center for Biotechnology Information (NCBI) Journal Microbiome Project Number PRJNA255974 DOI https://doi.org/10.1186/s40168-015-0103-8

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